Additional file 7: of Changes in the liver transcriptome of farmed Atlantic salmon (Salmo salar) fed experimental diets based on terrestrial alternatives to fish meal and fish oil

Figure S5. Alignment of nucleotide sequences corresponding to htra1a and htra1b. Conserved nucleotides in all three aligned sequences are highlighted in yellow, those conserved in two are highlighted in blue. The cDNA sequence named as “htra1b_assembly” was assembled using the Salmo salar EST sequences DW576053, DW556574, DW539580, EG831192, and EG831191. Htra1a and htra1b sequences share 91% identity over 1117 aligned nucleotides. The alignment and percentage identity calculation were performed using AlignX (Vector NTI Advance 11). The nucleotide regions covered by the probes C265R134, C231R170 and C170R142 from the Agilent 44 K salmonid microarray (GEO accession number: GPL11299) is indicated within boxes. Forward qPCR primers are in bold and single underlined, whereas reverse qPCR primers are in bold and double underlined. (DOCX 37 kb)