12864_2015_2259_MOESM1_ESM.xlsx (515.12 kB)
Additional file 1: of Exploring transcriptomic diversity in muscle revealed that cellular signaling pathways mainly differentiate five Western porcine breeds
dataset
posted on 2015-12-12, 05:00 authored by Magali SanCristobal, Florian Rohart, Christine Lascor, Marcel Bouffaud, Lidwine Trouilh, Pascal G.P. Martin, Yannick Lippi, Thierry Tribout, Thomas Faraut, Marie-José Mercat, Denis Milan, Laurence Liaubet1,859 genes were identified to be differentially expressed between five breeds according to statistical analysis. 1,703 were differentially expressed with a linear mixed model (FDR < 0.1 %, column Pval. Breed.effect. BHcorrection) and 1,655 are declared differentially expressed between breeds with a pairwise analysis (FDR < 0.1 %; FDR < 5 % only for LWM compared to LWF, columns E to Y). This additional file corresponds to the analysis not restricted to autosomes. DU: Duroc; LWF: Large White dam line; LWM: Large White sire line; LR: Landrace; PI: Piétrain. (XLSX 515 kb)
