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Additional file 2 of Rust expression browser: an open source database for simultaneous analysis of host and pathogen gene expression profiles with expVIP

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posted on 2021-03-10, 04:38 authored by Thomas M. Adams, Tjelvar S. G. Olsson, Ricardo H. Ramírez-González, Ruth Bryant, Rosie Bryson, Pablo Eduardo Campos, Paul Fenwick, David Feuerhelm, Charlotte Hayes, Tina Henriksson, Amelia Hubbard, Radivoje Jevtić, Christopher Judge, Matthew Kerton, Jacob Lage, Clare M. Lewis, Christine Lilly, Udi Meidan, Dario Novoselović, Colin Patrick, Ruth Wanyera, Diane G. O. Saunders
Additional file 2: Supplementary Figure S1. Flexible filtering can be applied in the wheat expression browser. All expression values presented are for the candidate CAZY effector Pst_13661 in the Pst-130 genome (termed PST130_13650) [40]. Illustration of data filtered to display only samples from a single study [22] (A) or data only from germinated and ungerminated urediniospores and purified haustoria (B).

Funding

H2020 European Research Council Biotechnology and Biological Sciences Research Council Agriculture and Horticultural Development Board BASF Plc Limagrain UK Ltd. RAGT 2N SAS KWS UK Ltd. Syngenta UK Ltd Masstock Arable (UK) Ltd European Research Council () John Innes Foundation

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    BMC Genomics

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    RNA-SeqexpVIPGene expression browserWheat yellow rustPuccinia striiformis f. sp. triticiTranscriptomicsOpen science

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