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Additional file 1 of Genomic analysis based on chromosome-level genome assembly reveals Myrtaceae evolution and terpene biosynthesis of rose myrtle

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posted on 2024-06-11, 04:01 authored by Ling Yang, Jingjing Jin, Shanwu Lyu, Fangqiu Zhang, Peijian Cao, Qiaomei Qin, Guanghui Zhang, Chen Feng, Peng Lu, Huiguang Li, Shulin Deng
Supplementary Material 1: Fig S1. K-mer frequency distribution curve of Illumina short reads for the R. tomentosa genome by GenomeScope. Fig S2. Chromosome karyotype analysis of R. tomentosa. 2n = 2X = 22. Bar = 10 μM. Fig S3. Hi-C contact data mapped to the R. tomentosa chromosome. Fig S4. Merqury assembly spectrum plots for evaluating k-mer completeness to the R. tomentosa chromosome. Fig S5. Comparison of gene models between R. tomentosa with those in other species. Fig S6. Distribution of synonymous substitution levels (Ks) of paralogous (A) and orthologous genes (B). Fig S7. Go analysis of positively selected genes in R. tomentosa. Fig S8. Chromosomal location of TPSs on chromosomes in R. tomentosa.

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