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Additional file 1 of Activation and enhancement of caerulomycin A biosynthesis in marine-derived Actinoalloteichus sp. AHMU CJ021 by combinatorial genome mining strategies

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posted on 2020-08-07, 03:51 authored by Yunchang Xie, Jiawen Chen, Bo Wang, Tai Chen, Junyu Chen, Yuan Zhang, Xiaoying Liu, Qi Chen
Additional file 1: Additional file 1: Table S1. Genome features of Actinoalloteichus sp. AHMU CJ021; Table S2. Number of genes associated with the general COG functional categories; Table S3. The biosynthetic gene clusters of secondary metabolites in Actinoalloteichus sp. AHMU CJ021 analyzed by antiSMASH 5.0; Table S4. Deduced functions of the open reading frames (ORFs) indicated in Fig. 2; Table S5. Fermentation media used for caerulomycin A (CRM A) production; Table S6. The mutants obtained from ribosome engineering experiments; Table S7. The CRM A production comparison of three camE-expressing mutants; Table S8.1H NMR and 13C NMR spectral data of CRM A in DMSO-d6; Table S9. The comparison of selected mutants generated from UV mutagenesis; Table S10. CRM A production titer of optimal mutant XC-11GUR; Table S11. The dose of all factors in medium N2 by using Plackett-Burman Design; Table S12. Screening of significant variables for CRM A production in Medium N2 by using Plackett-Burman Design; Table S13. The effects of all factors of Medium N2 for CRM A production by using Plackett-Burman Design; Table S14. The dose of important factors in response surface analysis; Table S15. The design of experiments and response of CRM A production; Table S16. The primers used in identification of gentamycin-resistant mutant; Table S17. The primers used in gene expression analysis; Fig. S1. Phylogenetic tree of Actinoalloteichus sp. AHMU CJ021; Fig. S2. HR-ESI-MS spectrum of CRM A; Fig. S3.1H NMR spectrum of CRM A in DMSO-d6; Fig. S4.13C NMR spectrum of CRM A in DMSO-d6; Fig. S5. CRM A production comparison of different generations of mutants; Fig. S6. The quantitative HPLC standard curves.

Funding

National Natural Science Foundation of China Provincial Natural Science Research Project of Anhui Colleges and Universities Open Project Program of Guangdong Key Laboratory of Marine Materia Medica & Key Laboratory of Tropical Marine Bio-resources and Ecology, SCSIO, CAS Open Project Program of Key Laboratory of Functional Small Organic Molecule, Ministry of Education, Jiangxi Normal University Guangdong Provincial Key Laboratory of Genome Read and Write Shenzhen Engineering Laboratory for Innovative Molecular Diagnostics Guangdong Provincial Academician Workstation of BGI Synthetic Genomics

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