Additional file 4: Figure S3. of Recombination in pe/ppe genes contributes to genetic variation in Mycobacterium tuberculosis lineages
figure
posted on 2016-02-29, 05:00 authored by Jody Phelan, Francesc Coll, Indra Bergval, Richard Anthony, Rob Warren, Samantha Sampson, Nicolaas Gey van Pittius, Judith Glynn, Amelia Crampin, Adriana Alves, Theolis Bessa, Susana Campino, Keertan Dheda, Louis Grandjean, Rumina Hasan, Zahra Hasan, Anabela Miranda, David Moore, Stefan Panaiotov, Joao Perdigao, Isabel Portugal, Patricia Sheen, Erivelton de Oliveira Sousa, Elizabeth Streicher, Paul van Helden, Miguel Viveiros, Martin Hibberd, Arnab Pain, Ruth McNerney, Taane ClarkPhylogenetic tree constructed using 50,540 genome-wide SNPs. Clear clustering according to lineage can be seen (Lineage 1 (Indo-Oceanic, green), lineage 2 (East-Asian (Beijing), blue), lineage 3 (East-African-Indian, purple), lineage 4 (Euro-American, red)). Reference genomes are labelled. M. canetti is annotated in cyan. (TIF 69Â kb)
