Additional file: 3 of New insight into dolphin morbillivirus phylogeny and epidemiology in the northeast Atlantic: opportunistic study in cetaceans stranded along the Portuguese and Galician coasts

Phylogenetic tree for the N gene nucleotidic sequences. Phylogenetic tree generated with the aligned sequences for the N gene, inferred by Bayesian methods. Sequences for the outgroup taxa were retrieved from NCBI for Pilot Whale Morbillivirus (PWMV [accession number FJ842380]); Porpoise Morbillivirus (PMV [accession number X84739]); Phocine Distemper Virus (PDV [accession number KC802221]); Canine Distemper Virus (CDV [accession number AY649446]) and Measles Virus (MV [accession number NC001498]). Two sequences from 2007 (HQ829972 and HQ829973) and one from the 90’s (AJ608288) were also included in this tree. Sequences obtained for the N gene of Portuguese and Galician isolates were also included for animals Sc/15/2007 (KP835998), Dd/302/2012 (KP836000), Sc/257/2011 (KP835984), Dd/191/2013 (KP836004), Sc/53/2012 (KP835992), Sc/55/2012 (KP835988), Sc/11/2013 (KT878653), Sc/290/2014 (KT878655) and Sc/221/2012 (KT878654). (TIF 4079 kb)