Additional file 2: of New insight into dolphin morbillivirus phylogeny and epidemiology in the northeast Atlantic: opportunistic study in cetaceans stranded along the Portuguese and Galician coasts

Phylogenetic tree for the H gene nucleotidic sequences. Phylogenetic tree generated with the aligned sequences for the H gene, inferred by Bayesian methods. Sequences for the outgroup taxa were retrieved from NCBI for Pilot Whale Morbillivirus (PWMV [accession number FJ842382]); Porpoise Morbillivirus (PMV [accession number FJ648457]); Phocine Distemper Virus (PDV [accession number KC802221]); Canine Distemper Virus (CDV [accession number AY649446]) and Measles Virus (MV [accession number NC001498]). Three DMV sequences from the 90’s were retrieved from NCBI and included in the trees (Z36778; AJ224705 and AJ608288) along with two sequences from 2007 (HQ829972 and HQ829973). Sequences obtained for the H gene of Portuguese and Galician isolates were also included for animals Sc/31/2009 (KT878652), Sc/290/2014 (KT878651), Sc/221/2012 (KT878650), Sc/55/2012 (KP835989), Sc/11/2013 (KT878649), Dd/302/2012 (KP836001), Dd/191/2013 (KP836005), Sc/257/2011 (KP835985), Sc/53/2012 (KP835993), and Sc/15/2007 (KP835996). (TIF 3936 kb)