Additional file 2: Figure S1. of Recombination in pe/ppe genes contributes to genetic variation in Mycobacterium tuberculosis lineages
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posted on 2016-02-29, 05:00 authored by Jody Phelan, Francesc Coll, Indra Bergval, Richard Anthony, Rob Warren, Samantha Sampson, Nicolaas Gey van Pittius, Judith Glynn, Amelia Crampin, Adriana Alves, Theolis Bessa, Susana Campino, Keertan Dheda, Louis Grandjean, Rumina Hasan, Zahra Hasan, Anabela Miranda, David Moore, Stefan Panaiotov, Joao Perdigao, Isabel Portugal, Patricia Sheen, Erivelton de Oliveira Sousa, Elizabeth Streicher, Paul van Helden, Miguel Viveiros, Martin Hibberd, Arnab Pain, Ruth McNerney, Taane ClarkAllele frequency spectra for each lineage by synonymous (blue) and non-synonymous (red) mutations. The peaks at intermediate allele frequencies include sub-lineage defining SNPs (Lineage 1 Indo-Oceanic; Lineage 2 East-Asian (Beijing); Lineage 3 East-African-Indian; Lineage 4 Euro-American). (TIF 207Â kb)
