Springer Nature
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MOESM2 of Identification of genetic variation in the swine toll-like receptors and development of a porcine TLR genotyping array

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posted on 2016-03-31, 05:00 authored by Alex Clop, Abe Huisman, Pieter As, Abdoallah Sharaf, Sophia Derdak, Armand Sanchez
Additional file 2. Target TLR genomic regions. The coordinates correspond to the Sscrofa10.2 genome assembly. The column “portion without sequence information (bp)” indicates the number of bp that were sequenced to a depth of less than 1000. The column “cds and UTR content” indicates whether that genomic portion correspond to coding sequence or/and to UTR. The column “cause of missing sequence information” indicates the reason for lack of sequence information for the corresponding segment. There are two legends: “missing capture baits” indicate that Agilent capture baits that cover this segment could not be designed; “homologous region in the swine genome” indicates that although the baits were designed and the segment was sequenced, the corresponding sequence reads could not be unambiguously mapped to that region.


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