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12864_2021_8266_MOESM8_ESM.csv (18.51 kB)

Additional file 8 of Extensive evaluation of ATAC-seq protocols for native or formaldehyde-fixed nuclei

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posted on 2022-03-17, 04:30 authored by Hao Zhang, Michael E. Rice, Joseph W. Alvin, Dominique Farrera-Gaffney, James J. Galligan, Michael D. L. Johnson, Darren A. Cusanovich
Additional file 8: Supplementary Table S8. Differential motif deviation analysis results generated using chromVAR in fixed samples. Files contain results for differential deviation score tests between clusters for all motifs. Column 1 is the human motif ID from JASPAR CORE database; Columns 2 and 3 indicate the p value and adjusted p value calculated by the differentialDeviations function in chromVAR; Column 4 shows the difference between the mean of bias corrected deviations in 37°C samples and the mean of bias corrected deviations in 55°C samples.