13059_2015_746_MOESM6_ESM.txt (171.4 kB)
Additional file 6: of Comparative genomics of Steinernema reveals deeply conserved gene regulatory networks
dataset
posted on 2015-09-21, 05:00 authored by Adler Dillman, Marissa Macchietto, Camille Porter, Alicia Rogers, Brian Williams, Igor Antoshechkin, Ming-Min Lee, Zane Goodwin, Xiaojun Lu, Edwin Lewis, Heidi Goodrich-Blair, S. Stock, Byron Adams, Paul Sternberg, Ali MortazaviS. carpocapsae and S. feltiae orthologs with conserved expression (cosine similarity > 0.95). Lists 1,438âS. carpocapsae orthologs that have conserved expression with S. feltiae during nematode development. The file includes the gene ID of S. carpocapsae (column 1), the ortholog expression similarity (cosine similarity, column 2), the expression values (in TPM) of the S. carpocapsae and S. feltiae orthologs during the time course in replicates (columns 3â18), and the stage(s) that the ortholog expression is conserved in (column 19). (TXT 171Â kb)
