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Additional file 4 of Large-scale analysis of sheep rumen metagenome profiles captured by reduced representation sequencing reveals individual profiles are influenced by the environment and genetics of the host

dataset

posted on 2023-09-19, 03:21 authored by Melanie K. Hess, Hannah E. Hodgkinson, Andrew S. Hess, Larissa Zetouni, Juliana C. C. Budel, Hannah Henry, Alistair Donaldson, Timothy P. Bilton, Tracey C. van Stijn, Michelle R. Kirk, Ken G. Dodds, Rudiger Brauning, Alan F. McCulloch, Sharon M. Hickey, Patricia L. Johnson, Arjan Jonker, Nickolas Morton, Shaun Hendy, V. Hutton Oddy, Peter H. Janssen, John C. McEwan, Suzanne J. Rowe

Additional file 4: Supplemental Table 7: Heritability and repeatability estimates and standard errors for the reference-based approach. Supplemental Table 8: Heritability and repeatability estimates and standard errors for genera from the reference-free taxonomic assignments.

Funding

Livestock Research Group of the Global Research Alliance on Agricultural Greenhouse Gasses AgResearch Meat and Livestock Australia and the Australian Commonwealth Government Beef and Lamb New Zealand Genetics New Zealand Agricultural Greenhouse Gas Research Centre Pastoral Greenhouse Gas Research Consortium Ministry of Business, Innovation and Employment

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Keywords

Genotyping-by-sequencing Restriction enzyme reduced representation sequencing Rumen microbiome Metagenome Genetics Reference based Reference free

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