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Additional file 3 of txci-ATAC-seq: a massive-scale single-cell technique to profile chromatin accessibility

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posted on 2024-08-15, 03:15 authored by Hao Zhang, Ryan M. Mulqueen, Natalie Iannuzo, Dominique O. Farrera, Francesca Polverino, James J. Galligan, Julie G. Ledford, Andrew C. Adey, Darren A. Cusanovich
Additional file 3: Table S2. Enriched motifs in more accessible and less accessible peaks in response to CC16 deficiency for each cell type. This table is provided as a separate file. Column 1: Cell type in which the test was performed. Column 2: Changing direction of differentially accessible peaks that were used to perform the test. Column 3: Motif ID. Column 4: Motif name. Column 5: The number of differential peaks that contain the motif identified. Column 6: The number of background peaks that contain the motif identified. Column 7: The percentage of differential peaks that contain the motif identified. Column 8: The percentage of background peaks that contain the motif identified. Column 9: The ratio of the observed frequency of the motif in differential peaks to the expected frequency calculated by the background peaks. Column 10: Raw p-value. Column 11: FDR-adjusted p-value.

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National Institute of General Medical Sciences National Institute of Mental Health National Institute of Environmental Health Sciences National Heart, Lung, and Blood Institute

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