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Additional file 2 of The landscape of human tissue and cell type specific expression and co-regulation of senescence genes

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posted on 2022-01-10, 04:10 authored by Peng Xu, Minghui Wang, Won-min Song, Qian Wang, Guo-Cheng Yuan, Peter H. Sudmant, Habil Zare, Zhidong Tu, Miranda E. Orr, Bin Zhang
Additional file 2: Table S1. The SnG-enriched modules in 50 human tissues. Table S2. The k-means clusters of SnGs. Table S3. The k-means clusters of SnG-enriched modules. Table S4. The conserved 3-layer neighborhood of CDKN1A in the co-expression networks. Table S5. The conserved 3-layer neighborhood of TP53 in the co-expression networks. Table S6. The aggregated network of SnG-enriched modules. Table S7. The SASP factors from the aggregated network and their regulations by senescence and CDKN1A. Table S8. The cell types enriched (FDR < 0.01) for each SnG-enriched module. Table S9. The age correlation of aggregated network genes. Table S10. The modules M81 and M82 in the brain hippocampus. Table S11. Gene coexistence proportion between senescence markers and aggregated network genes in single brain cells. Table S12. The module M6 in the testis. Table S13. Gene coexistence proportion between senescence markers and aggregated network genes in single testis cells. Table S14. The Cell communications between pancreas ductal cells and other cell types.

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national institute on aging u.s. department of veterans affairs

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