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Additional file 2 of Stratified microbial communities in Australia’s only anchialine cave are taxonomically novel and drive chemotrophic energy production via coupled nitrogen-sulphur cycling

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posted on 2023-08-26, 03:20 authored by Timothy M. Ghaly, Amaranta Focardi, Liam D. H. Elbourne, Brodie Sutcliffe, William Humphreys, Ian T. Paulsen, Sasha G. Tetu
Additional file 2: Supplementary Table S1. Illumina sequencing output and coverage information. Supplementary Table S2. Physiochemical measurements from Bundera Sinkhole (obtained from Elbourne et al. 2022). Supplementary Table S3. Pairwise PERMANOVA on depth-specific groups inferred from the beta-diversity visualisations of key metabolic genes and whole metagenomes from Bundera Sinkhole. Supplementary Table S4. Correlations between chemical compound concentrations and genes involved in their cycling. Supplementary Table S5. Correlations between dissolved organic carbon (DOC) concentrations and the relative abundance of nitrogen and sulphur cycling genes. Supplementary Table S6. Summary of metagenome-assembled genomes from Bundera Sinkhole. Supplementary Table S7. Pairwise PERMANOVA on depth-specific groups inferred from the beta-diversity visualisations of MAG phyla in Bundera Sinkhole. Supplementary Table S8. Genetic markers used to infer functional traits of MAGs in Bundera Sinkhole. Supplementary Table S9. Average relative abundance of MAGs that carry the genetic markers for each trait. Supplementary Table S9. Average relative abundance of MAGs that carry the genetic markers for each trait. Supplementary Table S10. Proportion of MAGs assigned to each phylum that drive each functional traitSupplementary Table S11. Annotated transporters encoded by the four most highly abundant MAGsSupplementary

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Australian Research Council, Australia

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