13059_2017_1241_MOESM2_ESM.xlsx (1.94 MB)
Additional file 2: of Lineage-specific rediploidization is a mechanism to explain time-lags between genome duplication and evolutionary diversification
dataset
posted on 2017-06-14, 05:00 authored by Fiona Robertson, Manu Gundappa, Fabian Grammes, Torgeir Hvidsten, Anthony Redmond, Sigbjørn Lien, Samuel Martin, Peter Holland, Simen Sandve, Daniel MacqueenPhylogenomic analysis. Full data associated with the 383 ohnologue gene trees used to define LORe and AORe regions, including: (i) NCBI accession number and gene/protein details for sequence capture probes, (ii) genomic location of ohnologues in the Atlantic salmon genome, (iii) the length of each sequence alignment, (iv) the substitution model used for Bayesian phylogenetic analysis, (iv) the number of inferred rediploidization events (v), each gene tree (nexus format), and (vi) alignments used to generate each gene tree (fasta format). (XLSX 1984 kb)