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Additional file 2 of ERα-related chromothripsis enhances concordant gene transcription on chromosome 17q11.1-q24.1 in luminal breast cancer

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posted on 2020-05-15, 03:39 authored by Chun-Lin Lin, Xi Tan, Meizhen Chen, Meena Kusi, Chia-Nung Hung, Chih-Wei Chou, Ya-Ting Hsu, Chiou-Miin Wang, Nameer Kirma, Chun-Liang Chen, Ching-Hung Lin, Kate I. Lathrop, Richard Elledge, Virginia G. Kaklamani, Kohzoh Mitsuya, Tim H.-M. Huang

Additional file 2: Table S1. Frequencies of dense-ERα-binding-site related chromosomal rearrangements in five targeted regions. Table S2. Primer sequences used in Nanopore sequencing. Table S3. Primer sequences used in CRISPR/Cas9 experiments. Table S4. Primer sequences used in copy-number analysis. Table S5. Demographic and clinical characteristics of CTC patient samples.

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National Institutes of Health Cancer Prevention and Research Institute of Texas Cancer Prevention and Research Institute of Texas (US)

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Keywords

Luminal subtype breast cancer Chromosomal rearrangement ERα Chromothripsis Concordant transcription Druggable target Nanopore sequencing

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