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Additional file 2 of Crop management shapes the diversity and activity of DNA and RNA viruses in the rhizosphere

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posted on 2022-10-25, 03:33 authored by George Muscatt, Sally Hilton, Sebastien Raguideau, Graham Teakle, Ian D. E. A. Lidbury, Elizabeth M. H. Wellington, Christopher Quince, Andrew Millard, Gary D. Bending, Eleanor Jameson
Additional file 2: Supplementary Table S1. Sample metadata for all sample libraries. Supplementary Table S2. DNA viral population read counts. Supplementary Table S3. ssRNA viral population read counts. Supplementary Table S4. 16S rRNA OTU read counts. Supplementary Table S5. Viral gene read counts. Supplementary Table S6. PERMANOVA testing of contribution of soil compartment, crop rotation strategy and growth stage on viral and bacterial community composition. Supplementary Table S7. Mixed effect model output for linear relationship between the number of active vOTUs detected and relative host abundance. Supplementary Table S8. Mixed effect model output for linear relationship between the number of active vOTUs detected and bacterial community alpha diversity. Supplementary Table S9. Mixed effect model output for linear relationship between the number of active vOTUs detected and bacterial community alpha diversity. Supplementary Table S10. PERMANOVA testing of contribution of soil compartment and crop rotation strategy on viral community activity of viral fractions.

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Engineering and Physical Sciences Research Council Biotechnology and Biological Sciences Research Council Medical Research Council

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