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Additional file 1 of Functional annotation of a divergent genome using sequence and structure-based similarity

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posted on 2024-01-03, 05:01 authored by Dennis Svedberg, Rahel R. Winiger, Alexandra Berg, Himanshu Sharma, Christian Tellgren-Roth, Bettina A. Debrunner-Vossbrinck, Charles R. Vossbrinck, Jonas Barandun
Additional file 1: Annotation table V. necatrix. Table “suppl_tbl_1_genome_annotations” contains all locus tags and the resulting structure-based annotations. Further, the ProtNLM results are included and the differences to our annotation are indicated (x: different annotations, y: non-identified, z: potential misannotations, e: experimental structure). In addition, the spore-0hr RNA sequence counts are listed per gene. Table “suppl_tbl_1_InterPro” contains all locus tags, the ANNOTEX annotations and all Interproscan (5.65-97.0-64-bit) results. Interproscan was executed with standard parameters and all available analyses except those that use licensed code

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Umea University

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