MOESM9 of Plasmodium falciparum parasite population structure and gene flow associated to anti-malarial drugs resistance in Cambodia

Additional file 9. Gene flow analysis based on uneven distribution of alleles in the P. falciparum population over Cambodia. The barcode is represented by 11 genomic positions presenting two types of allele per site: the reference allele which is found in 3D7 reference genome (REF) and the alternative allele (ALT). Over representation of one of the REF/ALT allele in a local parasite population was evaluated using a Chi squared analysis. The allele was in blue for REF and dark red for ALT. The box was in grey when the Chi squared test statistics components (one component for each health centre) was less than 1. Allele distribution is presented for barcode position BC01 to BC10. Barcode position BC11 was not suitable for Chi squared analysis. Corresponding position in the barcode in surrounded in red. The significant health centres which are close together were circled. A. Allele distribution for barcode BC01. B. Allele distribution for barcode BC02. C. Allele distribution for barcode BC03. D. Allele distribution for barcode BC04. E. Allele distribution for barcode BC05. F. Allele distribution for barcode BC06. G. Allele distribution for barcode BC07. H. Allele distribution for barcode BC08. I. Allele distribution for barcode BC09. J. Allele distribution for barcode BC10.