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MOESM9 of Histone modifications rather than the novel regional centromeres of Zymoseptoria tritici distinguish core and accessory chromosomes

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posted on 2015-10-01, 05:00 authored by Klaas Schotanus, Jessica Soyer, Lanelle Connolly, Jonathan Grandaubert, Petra Happel, Kristina Smith, Michael Freitag, Eva Stukenbrock
Additional file 9: Table S5. Putative genes in centromeric regions and their expression. In total, 39 putative genes were located within or overlapping centromeric regions. Genes with a mean RPKM value > 2 are considered expressed (indicated by √). Expression data were from a previous study [14] and both the original JGI [11] and our new gene IDs [12] are shown. Expression levels for control genes (GAP-DH, histone H3, beta-tubulin and CenH3) are shown for comparison. The mean expression level of centromeric genes on core chromosomes was 385.4 ± 1881.1 and on accessory chromosomes 1.72 ± 2.8.

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