MOESM3 of RNA 3D structure prediction guided by independent folding of homologous sequences

Additional file 3: Figure S2. The comparison of top100 of Rosetta and SimRNA. Top 100 models from SimRNA vs Rosetta visualized with Clanstix/CLANS for models of the target sequence for the TPP riboswitch. Models obtained with (A) Rosetta and (B) SimRNA. Top 100 models from Rosetta are very different from each other and they cluster around the correct, reference structure (pointed by the red arrow). Top 100 models from SimRNA showed less diverge and cluster all altogether.