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MOESM1 of Strong selection pressures maintain divergence on genomic islands in Atlantic cod (Gadus morhua L.) populations

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posted on 2019-10-30, 18:18 authored by Silvia Rodríguez-Ramilo, Matthew Baranski, Hooman Moghadam, Harald Grove, Sigbjørn Lien, Mike Goddard, Theo Meuwissen, Anna Sonesson
Additional file 1: Figure S1. Patterns of coancestry ( $$f$$ f ) in all chromosomes (except 1, 2, 7 and 12) for the CC, NEAC, CC × NEAC and $$ f_{{{\text{CC}}\;{\&}\;NEAC}} $$ f CC & N E A C populations. The data provided represent values of coancestry smoothed by using a sliding window approach. Figure S2. Genetic differentiation coefficients ( $$F$$ F ST) between populations CC and NEAC in all chromosomes (except 1, 2, 7 and 12). The showed values are genetic differentiation coefficients smoothed by using a sliding window approach. Figure S3. Private allele frequency in populations CC (left column) and NEAC (right column) in all chromosomes (except 1, 2, 7 and 12). A sliding window approach was used to smooth the private allele frequency. Figure S4. Principal components analysis in populations CC and NEAC in all chromosomes (except 1, 2, 7 and 12). First two principal components on the SNP data available.

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