MOESM1 of Network reconstruction and systems analysis of plant cell wall deconstruction by Neurospora crassa
2017-09-21T05:00:00Z (GMT) by
Additional file 1. List of reactions, compounds and genes in the plant cell wall degradation network (PCWDN) of N. crassa. The first, second and third sheets contain the list of reactions, genes and compounds, respectively, in the PCWDN. The fourth sheet gives the participation of the PCWDN genes in the cellulose, hemicellulose, pectin and starch degradation pathways. The fifth and sixth sheets contain the feature matrix and annotation confidence scores, respectively, for genes in the PCWDN of N. crassa based on functional genomics, transcriptomics, proteomics and genetics data as well as biochemical characterizations. The seventh sheet contains a list of research articles utilized to reconstruct the PCWDN. The eighth sheet contains information on the structural units comprising the backbone and side chains of different plant cell wall polysaccharides such as cellulose, xylan, xyloglucan, mannan, galactomannan, glucomannan, galactoglucomannan, mixed-linkage glucan, homogalacturonan, xylogalacturonan, rhamnogalacturonan I, amylose and amylopectin. NoC no carbon, CB cellobiose, XG xyloglucan, MLG mixed-linkage glucan, OPP orange peel powder.