13028_2019_486_MOESM1_ESM.tif (2 MB)
MOESM1 of Investigation of urban birds as source of β-lactamase-producing Gram-negative bacteria in Marseille city, France
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posted on 2019-11-01, 08:15 authored by Edgarthe Ngaiganam, Isabelle Pagnier, Wafaa Chaalal, Thongpan Leangapichart, Selma Chabou, Jean-Marc Rolain, Seydina DieneAdditional file 1. Protein alignment of identified β-lactamase enzymes from bird samples. A) Sequence alignment of TEM-1 proteins compared with reference TEM-1 protein (JQ735917) retrieved from the ARG-ANNOT database. B) Sequence alignment of CTX-M proteins compared with reference proteins of CTX-M-15 (JQ686199) and CTX-M-1 (X92506). All sequenced blaTEM-1 genes (814-bp) exhibited 99.61% aa similarity with the TEM-1 reference sequence. blaCTX-M-15 and blaCTX-M-1 genes (855-bp) exhibited 100% aa similarity with CTX-M-15 and CTX-M-1 respectively.
