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Additional file 8: Figure S3. of Development of pathogenicity predictors specific for variants that do not comply with clinical guidelines for the use of computational evidence

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posted on 2017-08-11, 05:00 authored by Elena Campa, NatĂ lia Padilla, Xavier Cruz
In the coincidence rule (see main text) computational information is accepted as supporting evidence in clinical settings only when the pathogenicity predictions of different methods agree. Here we describe how the success rate of this rule depends on the chosen in silico predictors. (A) Violin plots for the Accuracy grouped by method. Each violin plot corresponds to all possible combinations of reference predictors that include the method shown at the bottom. For example, the first plot to the left represents all combinations of five reference predictors (SIFT, PolyPhen-2, PON-P2, CADD and Mutation Taster2) that include MutationTaster2. (B) Dependence of Accuracy values on the number of predictors used to implement the coincidence rule. (PNG 135 kb)

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