Additional file 7: of Living apart together: crosstalk between the core and supernumerary genomes in a fungal plant pathogen

RIPcal analysis of transposable element families on the core and the supernumerary genome. A comprehensive RIPcal analysis was performed on the core and the supernumerary genome separately. Based on an unbiased approach, 13 families out of 33 show patterns typical for RIP, and this is only detected on the core genome. (PPTX 735 kb)