Additional file 7: Table S2. of Extending colonic mucosal microbiome analysisâassessment of colonic lavage as a proxy for endoscopic colonic biopsies

Watt, Euan; Gemmell, Matthew; Berry, Susan; Glaire, Mark; Farquharson, Freda; Louis, Petra; Murray, Graeme; El-Omar, Emad; Hold, Georgina

doi:10.6084/m9.figshare.c.3606995_D7.v1

40168_2016_207_MOESM7_ESM.doc (45 kB)

Additional file 7: Table S2. of Extending colonic mucosal microbiome analysisâassessment of colonic lavage as a proxy for endoscopic colonic biopsies

journal contribution

posted on 2016-11-25, 05:00 authored by Euan Watt, Matthew Gemmell, Susan Berry, Mark Glaire, Freda Farquharson, Petra Louis, Graeme Murray, Emad El-Omar, Georgina Hold

LEfSe results for OTUs with an LDA greater than two (effect size) and a significant p value (>0.05). Two classes were compared, biopsy samples and colonic lavage samples from the study cohort. Class refers to the sample type with the highest OTU abundance as detected by LEfSe. The LogMax mean is the log of the highest class average. (DOC 48 kb)