Additional file 5 of Tracing regulatory routes in metabolism using generalised supply-demand analysis

An IPython notebook file in which the results shown in Figs. 4, 5, 6, 7, 8, 9, 10, 11, 12 and 13, Table 3 and Additional file 6 are generated using PySCeS and PySCeSToolbox. This notebook requires the model files provided in Additional files 1 and 2. Software needed: IPython notebook with PySCeS and PySCeSToolbox as requirements (see https://github.com/PySCeS/PyscesToolbox for full requirements and installation instructions). (IPYNB 5 kb)