Additional file 5: of Pipeline for specific subtype amplification and drug resistance detection in hepatitis C virus

Figure S2. Subtype-specific oligonucleotides designed to sequence the NS5A-coding region. Residue numbering is according to the reference strain AF009606. Positions in red are conserved among the different subtypes, and positions with different colors are discriminatory of a specific subtype (color codes given in the left column at each panel). Discriminatory positions for genotype are highlighted in pink. (PDF 1014 kb)