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Additional file 5 of MARPLE, a point-of-care, strain-level disease diagnostics and surveillance tool for complex fungal pathogens
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posted on 2019-08-13, 04:00 authored by Guru Radhakrishnan, Nicola Cook, Vanessa Bueno-Sancho, Clare Lewis, Antoine Persoons, Abel Mitiku, Matthew Heaton, Phoebe Davey, Bekele Abeyo, Yoseph Alemayehu, Ayele Badebo, Marla Barnett, Ruth Bryant, Jeron Chatelain, Xianming Chen, Suomeng Dong, Tina Henriksson, Sarah Holdgate, Annemarie Justesen, Jay Kalous, Zhensheng Kang, Szymon Laczny, Jean-Paul Legoff, Driecus Lesch, Tracy Richards, Harpinder Randhawa, Tine Thach, Meinan Wang, Mogens Hovmøller, David Hodson, Diane SaundersA minimum of 100 Pst genes is sufficient to accurately reconstruct the global phylogeny. Phylogenetic trees were generated with 1690, 1006, 748, 500, 402, 301, 204, 151 and 100 of the most polymorphic genes using a maximum-likelihood approach. Colours represent Pst isolates from similar geographical locations and/or genetic backgrounds. (EPS 2671 kb)
