12864_2016_2697_MOESM5_ESM.xlsx (11.71 kB)
Additional file 5: Table S2. of Germ cell and tumor associated piRNAs in the medaka and Xiphophorus melanoma models
dataset
posted on 2016-05-17, 05:00 authored by Susanne Kneitz, Rasmi R. Mishra, Domitille Chalopin, John Postlethwait, Wesley C. Warren, Ronald B. Walter, Manfred SchartlNumber of sequences produced by the primary or secondary biogenesis pathway. First column: absolute numbers of sequence reads with uridine at position1 (1U) and no adenine at the 10th position (10A) indicating piRNAs generated by the primary pathway. 2nd column: sequence reads with no uridine at position 1 but 10A. All other sequence reads were excluded. Only sequence reads mapping to germline, tumor or control samples in medaka and Xiphophorus were considered. 3rd column: ratio for 1U/10A as a measure for the preference of the primary or secondary biogenesis pathway was calculated. Column 4â6: analogous to columns 1â3, but with guanine instead of uridine and adenine. (XLSX 11Â kb)