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Additional file 4: of Alignment-free genome comparison enables accurate geographic sourcing of white oak DNA

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posted on 2018-12-10, 05:00 authored by Kujin Tang, Jie Ren, Richard Cronn, David Erickson, Brook Milligan, Meaghan Parker-Forney, John Spouge, Fengzhu Sun
Figure S5. The circular plots for independent samples sequenced using a) Illumina NGS of a California Valley Oak tree, b) a mixture of short- and long read from with both Illumina and PacBio sequencing of the Pendunculate Oak tree, and c) seven diverse tree samples using RAD-seq. The (A) d 2 S $$ {d}_2^S $$ dissimilarity and (B) Manhattan distance measures of each independent sample with the 92 reference samples were calculated and the two most similar reference samples are linked. (PDF 225 kb)

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