12915_2017_348_MOESM4_ESM.pdf (111.76 kB)
Additional file 4: Figure S4. of Rapid, precise quantification of bacterial cellular dimensions across a genomic-scale knockout library
journal contribution
posted on 2017-02-21, 05:00 authored by Tristan Ursell, Timothy Lee, Daisuke Shiomi, Handuo Shi, Carolina Tropini, Russell Monds, Alexandre Colavin, Gabriel Billings, Ilina Bhaya-Grossman, Michael Broxton, Bevan Huang, Hironori Niki, Kerwyn HuangMorphological analysis of the Keio collection reveals correlations between cell width and intracellular width variability. Contours from cells from each Keio deletion strain were extracted from images acquired from the NBRP repository and used to compute the mean width and width profile across each cell. For each cell, we then computed the standard deviation of the width profile divided by the mean width to obtain the intracellular width variability. White circles and error bars were obtained by binning strains by mean width; blue lines are the fit to binned averages. R is Pearsonâs correlation coefficient; p-value was computed with Studentâs t-test. (PDF 111Â kb)