Additional file 4: Figure S3. of Phylogenomics of the olive tree (Olea europaea) reveals the relative contribution of ancient allo- and autopolyploidization events

Topological analysis of seven different species. a Possible scenarios and alternative topologies after a duplication. Topology A (TA): After the duplication, both sides maintain gene copies in at least one species of set species 1 and set species 2. TB: One of the sides lost all of set species 2. TC: One of the sides lost all of set species 1. b Pie charts representing the distribution of gene trees supporting each of the different topologies for the phylomes of Phaseolus vulgaris (bean), Solanum commersonii (wild potato), Scophthalmus maximus (fishes), and Rhizopus delemar (Mucoromycotina), taken from PhylomeDB. c Percentage of gene trees supporting each topology for the phylomes of U. gibba, S. miltiorrhiza, and M. guttatus. (TIFF 854 kb)