Additional file 3: of Neutral models of short-term microbiome dynamics with host subpopulation structure and migration limitation

Figure S3. α-diversity trace plots of individual microbiomes over host lifespan. Individual within-host diversity plots show under both structured population (1024 demes and host migration rate = e − 10 ) and unstructured population, individual α-diversity increases along time after birth. The blue lines represent hosts who are still alive before our simulation ends. The red lines represent hosts whose death events are observed by the end of our simulation. (TIF 5367 kb)