Additional file 3: Figure S1. of Genetic diversity in the plasticity zone and the presence of the chlamydial plasmid differentiates Chlamydia pecorum strains from pigs, sheep, cattle, and koalas

Bayesian phylogenetic analyses of the C. pecorum pmp gene subtypes. Posterior probabilities > 0.70 are displayed on the tree nodes. A: C. pecorum pmps A,B, D, E, E, H gene family phylogenies from the 16 porcine, sheep, cattle, and koala C. pecorum strains analysed in this study; B: C. pecorum pmpG gene family phylogeny from the 16 porcine, sheep, cattle, and koala C. pecorum strains analysed in this study; C: pmpG1 phylogenetic tree constructed from the 2406 bp alignment of 16 porcine, sheep, cattle, and koala C. pecorum strains analysed in this study; and D: pmpG9 phylogenetic tree constructed from the 2841 bp alignment of 16 porcine, sheep, cattle, and koala C. pecorum strains analysed in this study. Hosts are indicated by the colouring in the legend. (PNG 300 kb)