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Additional file 2: of Pan-genomic analysis to redefine species and subspecies based on quantum discontinuous variation: the Klebsiella paradigm

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posted on 2015-09-30, 05:00 authored by AurĂŠlia Caputo, Vicky Merhej, Kalliopi Georgiades, Pierre-Edouard Fournier, Olivier Croce, Catherine Robert, Didier Raoult
Number of genes for all species studied associated with the 25 general COG functional categories. The Information storage and processing category is shown in red, the Cellular processes and signaling category is shown in green and the Metabolism category is shown in blue. The remaining items shown in white belong to the Poorly characterized category. A: RNA processing and modification; J: Translation, ribosomal structure and biogenesis; K: Transcription; L: Replication, recombination and repair; B: Chromatin structure and dynamics; D: Cell cycle control, cell division, chromosome partitioning; M: Cell wall/membrane/envelope biogenesis; N: Cell motility; O: Posttranslational modification, protein turnover, chaperones; P: Inorganic ion transport and metabolism; T: Signal transduction mechanisms; U: Intracellular trafficking, secretion, and vesicular transport; C: Energy production and conversion; Q: Secondary metabolites biosynthesis, transport and catabolism; E: Amino acid transport and metabolism; F: Nucleotide transport and metabolism; G: Carbohydrate transport and metabolism; H: Coenzyme transport and metabolism; I: Lipid transport and metabolism; R: General function prediction only; S: Function unknown. (PDF 27 kb)

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