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Additional file 2: Table ST1. of Unity in defence: honeybee workers exhibit conserved molecular responses to diverse pathogens

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posted on 2017-03-02, 05:00 authored by Vincent Doublet, Yvonne Poeschl, Andreas Gogol-Döring, Cédric Alaux, Desiderato Annoscia, Christian Aurori, Seth Barribeau, Oscar Bedoya-Reina, Mark Brown, James Bull, Michelle Flenniken, David Galbraith, Elke Genersch, Sebastian Gisder, Ivo Grosse, Holly Holt, Dan Hultmark, H. Lattorff, Yves Le Conte, Fabio Manfredini, Dino McMahon, Robin Moritz, Francesco Nazzi, Elina Niño, Katja Nowick, Ronald van Rij, Robert Paxton, Christina Grozinger
List of 7,077 genes ordered by their rank product after the rank product analysis looking for up-regulated genes. Genes ordered from higher ranks (up-regulated) to lower ranks (non-regulated). Table ST2. List of 7,077 genes ordered by their rank product after the rank product analysis looking for down-regulated genes. Genes ordered from higher ranks (down-regulated) to lower ranks (non-regulated). Table ST3. List of 7,077 genes ordered by their rank product after the rank product analysis looking for differentially-regulated genes. Genes ordered from higher ranks (differentially-regulated) to lower ranks (non-regulated). Table ST4. List of 7,077 genes ordered by their rank product after the directed rank product analysis looking for up-regulated genes in abdominal tissue, after Nosema infection. Table ST5. List of 7,077 genes ordered by their rank product after the directed rank product analysis looking for down-regulated genes in abdominal tissue, after Nosema infection. Table ST6. Functional analysis (GO slim) based on top up-regulated genes in abdominal tissues (gut, fat body or all abdomen) upon infection by Nosema. Cut-off < 0.01 uncorrected p-value, genes from S4 Table. Table ST7. Functional analysis (GO slim) based on top down-regulated genes in abdominal tissues (gut, fat body or all abdomen) upon infection by Nosema. Cut-off < 0.01 uncorrected p-value, genes from S5 Table. Table ST8. List of 7,077 genes ordered by their rank product after the directed rank product analysis looking for up-regulated genes after RNA virus infection and Varroa infestation. Table ST9. List of 7,077 genes ordered by their rank product after the directed rank product analysis looking for down-regulated genes after RNA virus infection and Varroa infestation. Table ST10. Functional analysis (GO slim) based on top up-regulated genes upon infection by RNA virus and Varroa infestation. Cut-off < 0.01 uncorrected p-value, genes from S8 Table. Table ST11. Functional analysis (GO slim) based on top down-regulated genes upon infection by RNA virus and Varroa infestation. Cut-off < 0.01 uncorrected p-value, genes from S9 Table. Table ST12. List of the 209 highly connected (hub) genes with at least 34 inter-gene connections. Table ST13. List of genes involved in the immune gene network (Fig. 4C). Table ST14. List of immune genes used to construct the immune gene network (Fig. 4C). Table ST15. Experimental procedure and description of datasets. (XLSX 9947 kb)

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German Science Fondation

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