Additional file 2: Figure S2. of A multi-omic analysis of human naĂŻve CD4+ T cells

Mitchell, Christopher; Getnet, Derese; Kim, Min-Sik; Manda, Srikanth; Kumar, Praveen; Huang, Tai-Chung; Pinto, Sneha; Nirujogi, Raja; Iwasaki, Mio; Shaw, Patrick; Wu, Xinyan; Zhong, Jun; Chaerkady, Raghothama; Marimuthu, Arivusudar; Muthusamy, Babylakshmi; Sahasrabuddhe, Nandini; Raju, Rajesh; Bowman, Caitlyn; Danilova, Ludmila; Cutler, Jevon; Kelkar, Dhanashree; Drake, Charles; Prasad, T.; Marchionni, Luigi; Murakami, Peter; Scott, Alan; Shi, Leming; Thierry-Mieg, Jean; Thierry-Mieg, Danielle; Irizarry, Rafael; Cope, Leslie; Ishihama, Yasushi; Wang, Charles; Gowda, Harsha; Pandey, Akhilesh

doi:10.6084/m9.figshare.c.3602660_D4.v1

12918_2015_225_MOESM2_ESM.pdf (68.93 kB)

Additional file 2: Figure S2. of A multi-omic analysis of human naĂŻve CD4+ T cells

journal contribution

posted on 2015-11-06, 05:00 authored by Christopher Mitchell, Derese Getnet, Min-Sik Kim, Srikanth Manda, Praveen Kumar, Tai-Chung Huang, Sneha Pinto, Raja Nirujogi, Mio Iwasaki, Patrick Shaw, Xinyan Wu, Jun Zhong, Raghothama Chaerkady, Arivusudar Marimuthu, Babylakshmi Muthusamy, Nandini Sahasrabuddhe, Rajesh Raju, Caitlyn Bowman, Ludmila Danilova, Jevon Cutler, Dhanashree Kelkar, Charles Drake, T. Prasad, Luigi Marchionni, Peter Murakami, Alan Scott, Leming Shi, Jean Thierry-Mieg, Danielle Thierry-Mieg, Rafael Irizarry, Leslie Cope, Yasushi Ishihama, Charles Wang, Harsha Gowda, Akhilesh Pandey

Sequence variants identified in the genome and classification of SNPs in protein coding regions. (A) Total number of SNPs, insertions, deletions and substitutions identified from whole genome sequencing data. (B) Proportion of synonymous and non-synonymous SNPs identified in the coding region of the genome among non-synonymous SNPs (nsSNPs), proportion of conservative and non-conservative homozygous and heterozygous changes are shown. (C) nsSNP frequency across various molecular classes of genes. (PDF 68 kb)