Additional file 1 of MSAIndelFR: a scheme for multiple protein sequence alignment using information on indel flanking regions

Supplementary materials. Additional file 1 contains more details about the modified version of FASTA model, example explains how both the sum–of–pairs (SP) and the total column (TC) values are computed, Boxplots of SP and TC value distributions of the MSAIndelFR and other MSA algorithms using OXBENCH, PREFAB and SABRE (SABmark) benchmarks, and the list of the 43 protein folds from the three different protein classes. (PDF 2703 kb)