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Additional file 1: of Cytolytic activity correlates with the mutational burden and deregulated expression of immune checkpoints in colorectal cancer
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posted on 2019-08-21, 04:28 authored by Apostolos Zaravinos, Constantinos Roufas, Majdi Nagara, Beatriz Lucas Moreno, Maria Oblovatskaya, Christodoulos Efstathiades, Christos Dimopoulos, Georgios AyiomamitisFigure S1. The voom function was used to transform the read counts into log counts per million (CPMs) while taking into account the mean-variance relationship in the data [68]. The mean-variance trend plots below were made to detect any genes that possibly varied in the data, and filtering of the low counts was performed adequately. (JPG 1492 kb)