Additional file 1: of A single-nuclei RNA sequencing study of Mendelian and sporadic AD in the human brain

Table S1. 118 cell type markers for Hicat Gene Marker. Table S2. Cell type markers. Table S3. Cerebral cortex layer-specific markers. Table S4. Distribution of nuclei per subject using CGS. Table S5. Distribution of nuclei per subject using Hicat Marker Gene. Table S6. Distribution of nuclei per subject using Consensus Gene Set. Table S7. Number of cells for Sample1 and Sample2 in each cluster using imputed Consensus Gene Set data. Table S8. DAM markers significantly associated with pseudo-time. Figure S1. Single nuclei after extraction from sample1. Figure S2. DotPlot depicting the expression of marker genes selected from the literature (see Table S2 and Table S3) on Classic Gene Set data. Figure S3. Hicat Gene Markers Dimensional Reduction approach. Figure S4. DotPlot depicting the expression of marker genes. Figure S5. Coincidence analysis between Consensus Gene Set and its gene expression imputed counterpart. Figure S6. Coincidence analysis between Classic Gene Set and its Consensus Gene Set. Figure S7. Entropy data. Figure S8. Multi-modal distributions of unique molecular identifier (UMI) per nuclei. (DOCX 4806 kb)