Additional file 1: Table S1. of Targeted alignment and end repair elimination increase alignment and methylation measure accuracy for reduced representation bisulfite sequencing data

Summary of different aligners/tools for RRBS (WGBS). Table S2. Tool performance comparison of MCF7 RRBS and 450 K array generated by ENCODE project. Figure S1. Correlation plot between 450 K array and RRBS from comparison tools for MCF7. Pair-wide scatter plot and correlation between Illumina 450 k array (y-axis) and RRBS analysed by each tool (X-axis) for MCF7 cell line. The highest correlation is seen in TRACE-RRBS (TRACE). (DOCX 477 kb)