Additional file 1: Figure S1. of Identification of regulatory modules in genome scale transcription regulatory networks

Co-regulation pattern in networks with different co-regulation probability (specified by the parameter prob). Network with higher prob is expected to have stronger co-regulation pattern. We generated two modules ‘a’ and ‘b’ in this example network. Modules are marked by different color. Zero-degree auxiliary nodes were not shown in the Fig. A) network generated with prob = 0.1 B) network generated with prob = 0.9 (PDF 38 kb)