Additional file 1: Figure S1. of Alternative cleavage and polyadenylation in spermatogenesis connects chromatin regulation with post-transcriptional control

Gene expression changes of proliferation genes and C/P-related genes. Figure S2. Analysis of cis elements around pAs of shortened 3’UTRs. Figure S3. ChIP-seq data for RNAPII and H3K4me3 in spermatids and spermatocytes. Figure S4. 3’UTR cis elements contribute to APA profiles in spermatogenesis. Figure S5. The effect of 3’UTR TEs on gene expression is independent of U-rich elements. Figure S6. Features of the introns containing regulated pAs. Figure S7. Transcript expression changes from 2 weeks to 4 weeks. Table S1. Top five more significant Ingenuity Canonical Pathways enriched for genes with shortened 3’UTRs as determined by the Ingenuity Pathway Analysis. Table S2. Statistics of 3’READS data. (PDF 625 kb)