40168_2020_790_MOESM19_ESM.pdf (134.26 kB)
Additional file 19 of A pipeline for targeted metagenomics of environmental bacteria
journal contribution
posted on 2020-03-24, 12:59 authored by Anissa Grieb, Robert M. Bowers, Monike Oggerin, Danielle Goudeau, Janey Lee, Rex R. Malmstrom, Tanja Woyke, Bernhard M. FuchsAdditional file 19: Figure S14. 16S rRNA consensus tree. The Vis6 cluster is targeted by the probes Vis6-814 and Vis6-871 and marked by the colored box. The closest cultured relative was Phaeocystitibacter luteus with appr. 90% sequence similarity. Nine 16S rRNA sequences, that have been binned to Vis6 MAGs from the Vis6 sorts, were placed in this tree. Six sequences were affiliated to Vis6 cluster C (marked in pink) and three sequences were affiliated to Flavobacterium ponti (in the outgroup). Flavobacterium ponti has appr. 86% 16S rRNA sequence identity to the Vis6 cluster.
