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Additional file 11: Figure S8. of Improvement in detection of minor alleles in next generation sequencing by base quality recalibration

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posted on 2016-02-27, 05:00 authored by Shengyu Ni, Mark Stoneking
Ti/Tv ratio among 247 mtDNA samples for minor alleles covered by at least two reads from each strand. Positive set: minor alleles with Segreg based LLR > 3, MAF > 0.001, SB < 1, PosRankSum > -3. Negative set, all other minor alleles. (PDF 4 kb)

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Max-Planck-Gesellschaft

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    BMC Genomics

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    Base quality recalibrationMinor allele detectionNext generation sequencing

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