12859_2018_2574_MOESM5_ESM.pdf (8.5 kB)
Additional file5: of MeDEStrand: an improved method to infer genome-wide absolute methylation levels from DNA enrichment data
journal contribution
posted on 2018-12-22, 05:00 authored by Jingting Xu, Shimeng Liu, Ping Yin, Serdar Bulun, Yang DaiFigure S1. Comparison of the methods MEDIPS_normal and MEDIPS. Pearson correlation coefficient (PCC) between MeDIP-seq and RRBS data calculated for four cell types: A GM12878; B K562; C foreskin fibroblasts; and D mammary epithelial. Y-axis shows the PCC. X-axis shows the varying parameter bin size from 25âbp to 100âbp. Boxplot illustrates the variation of PCC across the 22 chromosomes. (PDF 8 kb)